Evolutionary conservation of protein dynamics: insights from all-atom molecular dynamics simulations of ‘peptidase’ domain of Spt16-Reference-Cited by-同舟云学术

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Evolutionary conservation of protein dynamics: insights from all-atom molecular dynamics simulations of ‘peptidase’ domain of Spt16

Published:2021-12-31 Issue: Volume: Page:1-13
ISSN:0739-1102
Container-title:Journal of Biomolecular Structure and Dynamics
language:en
Short-container-title:Journal of Biomolecular Structure and Dynamics

Author:

Gaur Neeraj K.¹²³,Ghosh Biplab¹,Goyal Venuka Durani¹^ORCID,Kulkarni Kiran²³^ORCID,Makde Ravindra D.¹^ORCID

Affiliation:

1. Beamline Development and Application Section, Bhabha Atomic Research Centre, Mumbai, India

2. Division of Biochemical Sciences, CSIR-National Chemical Laboratory, Pune, India

3. Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India

Publisher

Informa UK Limited

Subject

Molecular Biology,General Medicine,Structural Biology

Link

https://www.tandfonline.com/doi/pdf/10.1080/07391102.2021.2021990

Reference74 articles.

1. GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers

2. PHENIX: a comprehensive Python-based system for macromolecular structure solution

3. Two-domain aminopeptidase of M1 family: Structural features for substrate binding and gating in absence of C-terminal domain

4. Normal modes for predicting protein motions: A comprehensive database assessment and associated Web tool

5. Crystal structure and dynamics of Spt16N-domain of FACT complex from Cicer arietinum

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1. Molecular dynamics of α-helix inside a protein with single helix;Journal of Biomolecular Structure and Dynamics;2024-01-30

2. In Search of a Dynamical Vocabulary: A Pipeline to Construct a Basis of Shared Traits in Large-Scale Motions of Proteins;Applied Sciences;2022-07-15

3. In search of a dynamical vocabulary: a pipeline to construct a basis of shared traits in large-scale motions of proteins;2022-06-22

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