An alignment- and reference-free strategy using <i>k</i> -mer present pattern for population genomic analyses-Reference-Cited by-同舟云学术

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An alignment- and reference-free strategy using k -mer present pattern for population genomic analyses

Published:2024-06-05 Issue: Volume: Page:1-15
ISSN:2150-1203
Container-title:Mycology
language:en
Short-container-title:Mycology

Author:

Shi Guohui¹,Dai Yi¹²,Zhou Da³,Chen Mengmeng¹²,Zhang Jiaqi¹²,Bi Yilong³,Liu Shuai²,Wu Qi¹^ORCID

Affiliation:

1. State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China

2. College of Life Science, University of the Chinese Academy of Sciences, Beijing, China

3. School of Mathematical Sciences, Xiamen University, Xiamen, China

Funder

the Strategic Priority Research Program of Science

National Natural Science Foundation of China

Senior User Project of RV KEXUE

Fundamental Research Funds for the Central Universities

Publisher

Informa UK Limited

Link

https://www.tandfonline.com/doi/pdf/10.1080/21501203.2024.2358868

Reference46 articles.

1. A global reference for human genetic variation

2. Enhancements to the ADMIXTURE algorithm for individual ancestry estimation

3. Fast model-based estimation of ancestry in unrelated individuals

4. PanKmer: k-mer-based and reference-free pangenome analysis

5. Is it time to change the reference genome?

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