A Convolutional Denoising Autoencoder for Protein Scaffold Filling

Author:

Sturtz Jordan,Annan Richard,Zhu BinhaiORCID,Liu XiaowenORCID,Qingge LetuORCID

Publisher

Springer Nature Singapore

Reference14 articles.

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2. Vincent, P., Larochelle, H., Bengio, Y., Manzagol, P.: Extracting and composing robust features with denoising autoencoders. In: Proceedings Of The 25th International Conference On Machine Learning, pp. 1096–1103 (2008)

3. Vincent Pascalvincent, P., Larocheh, L., Autoencoders, H.: Learning useful representations in a deep network with a local denoising criterion pierre-antoine manzagol. J. Mach. Learn Res. 11, pp. 3371–3408 (2010)

4. Qingge, L., Liu, X., Zhong, F., Zhu, B.: Filling a protein scaffold with a reference. IEEE Trans. Nanobiosci. 16, 123–130 (2017)

5. Liu, X., et al.: De novo protein sequencing by combining top-down and bottom-up tandem mass spectra. J. Proteome Res. 13, 3241–3248 (2014)

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