ITS1 amplicon sequencing of feline gut mycobiome of Malaysian local breeds using Nanopore Flongle-Reference-Cited by-同舟云学术

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ITS1 amplicon sequencing of feline gut mycobiome of Malaysian local breeds using Nanopore Flongle

Published:2022-05-11 Issue:6 Volume:204 Page:
ISSN:0302-8933
Container-title:Archives of Microbiology
language:en
Short-container-title:Arch Microbiol

Author:

Tay Darren Dean,Siew Shing Wei,Shamzir Kamal Shamrulazhar,Razali Mohd Najib,Ahmad Hajar Fauzan

Funder

Ministry of Higher Education, Malaysia

UMP-MTUN Industry Matching Grant

Publisher

Springer Science and Business Media LLC

Subject

Genetics,Molecular Biology,General Medicine,Biochemistry,Microbiology

Link

https://link.springer.com/content/pdf/10.1007/s00203-022-02929-3.pdf

Reference48 articles.

1. Ahmad HF, Mejia JLC, Krych L, Khakimov B, Kot W, Bechshøft RL, Reitelseder S, Højfeldt GW, Engelsen SB, Holm L, Faust K, Nielsen DS (2020) Gut mycobiome dysbiosis is linked to hypertriglyceridemia among home dwelling elderly danes. BioRxiv 2020.04.16.044693. https://doi.org/10.1101/2020.04.16.044693

2. Ahmad Kendong SM, Raja Ali RA, Nawawi KNM, Ahmad HF, Mokhtar NM (2021) Gut dysbiosis and intestinal barrier dysfunction: potential explanation for early-onset colorectal cancer. Front Cell Infect Microbiol 11(December):1–18. https://doi.org/10.3389/fcimb.2021.744606

3. Ariyawansa HA, Tanaka K, Thambugala KM, Phookamsak R, Tian Q, Camporesi E, Hongsanan S, Monkai J, Wanasinghe DN, Mapook A, Chukeatirote E, Kang JC, Xu JC, McKenzie EHC, Jones EBG, Hyde KD (2014) A molecular phylogenetic reappraisal of the Didymosphaeriaceae (= Montagnulaceae). Fungal Divers 68(1):69–104. https://doi.org/10.1007/s13225-014-0305-6

4. Banos S, Lentendu G, Kopf A, Wubet T, Glöckner FO, Reich M (2018) A comprehensive fungi-specific 18S rRNA gene sequence primer toolkit suited for diverse research issues and sequencing platforms. BMC Microbiol 18(1):1–15. https://doi.org/10.1186/s12866-018-1331-4

5. Bengtsson-Palme J, Ryberg M, Hartmann M, Branco S, Wang Z, Godhe A, De Wit P, Sánchez-García M, Ebersberger I, de Sousa F, Amend A, Jumpponen A, Unterseher M, Kristiansson E, Abarenkov K, Bertrand YJK, Sanli K, Eriksson KM, Vik U, Nilsson RH et al (2013) Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data. Methods Ecol Evol 4(10):914–919. https://doi.org/10.1111/2041-210X.12073

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