GWAS using low-pass whole genome sequence reveals a novel locus in canine congenital idiopathic megaesophagus-Reference-Cited by-同舟云学术

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GWAS using low-pass whole genome sequence reveals a novel locus in canine congenital idiopathic megaesophagus

Published:2023-04-11 Issue:3 Volume:34 Page:464-472
ISSN:0938-8990
Container-title:Mammalian Genome
language:en
Short-container-title:Mamm Genome

Author:

Bell Sarah M.,Evans Jacquelyn M.,Greif Elizabeth A.,Tsai Kate L.,Friedenberg Steven G.,Clark Leigh Anne

Funder

American Kennel Club Canine Health Foundation

Great Dane Club of America Charitable Trust

Publisher

Springer Science and Business Media LLC

Subject

Genetics

Link

https://link.springer.com/content/pdf/10.1007/s00335-023-09991-2.pdf

Reference56 articles.

1. Abrams SR, Hawks AL, Evans JM, Famula TR, Mahaffey M, Johnson GS, Mason JM, Clark LA (2020) Variants in FtsJ RNA 2’-O-methyltransferase 3 and growth hormone 1 are associated with small body size and a dental anomaly in dogs. Proc Natl Acad Sci U S A 117:24929–24935. https://doi.org/10.1073/pnas.2009500117

2. Aznaourova M, Schmerer N, Schmeck B, Schulte LN (2020) Disease-causing mutations and rearrangements in long non-coding RNA gene loci. Front Genet 11:527484. https://doi.org/10.3389/fgene.2020.527484

3. Bell SM, Evans JM, Evans KM, Tsai KL, Noorai RE, Famula TR, Holle DM, Clark LA (2022) Congenital idiopathic megaesophagus in the German shepherd dog is a sex-differentiated trait and is associated with an intronic variable number tandem repeat in Melanin-Concentrating Hormone Receptor 2. PLoS Genet 18:e1010044. https://doi.org/10.1371/journal.pgen.1010044

4. Bianchi M, Rafati N, Karlsson Å, Murén E, Rubin C-J, Sundberg K, Andersson G, Kämpe O, Hedhammar Å, Lindblad-Toh K, Rosengren Pielberg G (2020) Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs. BMC Genomics 21:307. https://doi.org/10.1186/s12864-020-6700-3

5. Browning SR, Browning BL (2007) Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering. Am J Hum Gene 81:1084–1097. https://doi.org/10.1086/521987

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