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Integration of Single-Cell and Bulk RNA-seq Data to Identify the Cancer-Associated Fibroblast Subtypes and Risk Model in Glioma

  • Published:2024-03-27 Issue: Volume: Page:
  • ISSN:0006-2928
  • Container-title:Biochemical Genetics
  • language:en
  • Short-container-title:Biochem Genet

Author:

Yan Xiuwei,Gao Xin,Dong Jiawei,Wang Fang,Jiang Xiaoyan,Hu Xueyan,Zhang Jiheng,Wang Nan,Xu Lei,Liu Zhihui,Hu Shaoshan,Zhao Hongtao

Funder

National Natural Science Foundation of China

Talent Introduction Project of Zhejiang Provincial People's Hospital

Publisher

Springer Science and Business Media LLC

Reference51 articles.

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2. Aran D, Hu Z, Butte AJ (2017) xCell: digitally portraying the tissue cellular heterogeneity landscape. Genome Biol 18:220. https://doi.org/10.1186/s13059-017-1349-1

3. Becht E, Giraldo NA, Lacroix L, Buttard B, Elarouci N, Petitprez F, Selves J, Laurent-Puig P, Sautès-Fridman C, Fridman WH, de Reyniès A (2016) Estimating the population abundance of tissue-infiltrating immune and stromal cell populations using gene expression. Genome Biol 17:218. https://doi.org/10.1186/s13059-016-1070-5

4. Bouffet E, Larouche V, Campbell BB, Merico D, de Borja R, Aronson M, Durno C, Krueger J, Cabric V, Ramaswamy V, Zhukova N, Mason G, Farah R, Afzal S, Yalon M, Rechavi G, Magimairajan V, Walsh MF, Constantini S, Dvir R, Elhasid R, Reddy A, Osborn M, Sullivan M, Hansford J, Dodgshun A, Klauber-Demore N, Peterson L, Patel S, Lindhorst S, Atkinson J, Cohen Z, Laframboise R, Dirks P, Taylor M, Malkin D, Albrecht S, Dudley RW, Jabado N, Hawkins CE, Shlien A, Tabori U (2016) Immune checkpoint inhibition for hypermutant glioblastoma multiforme resulting from germline biallelic mismatch repair deficiency. J Clin Oncol 34:2206–2211. https://doi.org/10.1200/jco.2016.66.6552

5. Cao R, Ma B, Wang G, Xiong Y, Tian Y, Yuan L (2021) Characterization of hypoxia response patterns identified prognosis and immunotherapy response in bladder cancer. Mol Ther Oncolytics 22:277–293. https://doi.org/10.1016/j.omto.2021.06.011
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