Controlling gene expression by DNA mechanics: emerging insights and challenges-Reference-Cited by-同舟云学术

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Controlling gene expression by DNA mechanics: emerging insights and challenges

Published:2016-11 Issue:S1 Volume:8 Page:23-32
ISSN:1867-2450
Container-title:Biophysical Reviews
language:en
Short-container-title:Biophys Rev

Author:

Levens David^ORCID,Baranello Laura,Kouzine Fedor

Funder

Intramural research program of the Center for Cancer REsearch, NCI, NIH

National Cancer Institute

Publisher

Springer Science and Business Media LLC

Subject

Molecular Biology,Structural Biology,Biophysics

Link

http://link.springer.com/content/pdf/10.1007/s12551-016-0243-5.pdf

Reference82 articles.

1. Bancaud A, Conde e Silva N, Barbi M et al (2006) Structural plasticity of single chromatin fibers revealed by torsional manipulation. Nat Struct Mol Biol 13:444–450. http://www.nature.com/nsmb/journal/v13/n5/suppinfo/nsmb1087_S1.html

2. Baranello L, Kouzine F, Levens D (2013) DNA topoisomerases beyond the standard role. Transcription 4:232–237

3. Baranello L, Wojtowicz D, Cui K, Devaiah B (2016) RNA polymerase II regulates topoisomerase 1 activity to favor efficient transcription. Cell 165:357–371. doi: 10.1016/j.cell.2016.02.036

4. Bates AD, Maxwell A (2005) DNA topology, 2nd edn. Oxford University Press, Oxford

5. Benham CJ (1993) Sites of predicted stress-induced DNA duplex destabilization occur preferentially at regulatory loci. Proc Natl Acad Sci USA 90:2999–3003

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1. Genome-wide profiling reveals functional interplay of DNA sequence composition, transcriptional activity, and nucleosome positioning in driving DNA supercoiling and helix destabilization in C. elegans;Genome Research;2021-06-24

2. Minimal Cylinder Analysis Reveals the Mechanical Properties of Oncogenic Nucleosomes;Biophysical Journal;2020-05

3. Custom DNA Microarrays Reveal Diverse Binding Preferences of Proteins and Small Molecules to Thousands of G-Quadruplexes;ACS Chemical Biology;2020-03-27

4. Job Opening for Nucleosome Mechanic: Flexibility Required;Cells;2020-03-01

5. How does supercoiling regulation on a battery of RNA polymerases impact on bacterial transcription bursting?;Physical Biology;2018-09-06

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