Relaxation mode analysis for molecular dynamics simulations of proteins-Reference-Cited by-同舟云学术

Relaxation mode analysis for molecular dynamics simulations of proteins

Published:2018-03-15 Issue:2 Volume:10 Page:375-389
ISSN:1867-2450
Container-title:Biophysical Reviews
language:en
Short-container-title:Biophys Rev

Author:

Mitsutake Ayori,Takano Hiroshi

Funder

JST PRESTO

Grant-in-Aid for Scientific Research (C

Publisher

Springer Science and Business Media LLC

Subject

Molecular Biology,Structural Biology,Biophysics

Link

http://link.springer.com/article/10.1007/s12551-018-0406-7/fulltext.html

Reference80 articles.

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2. Amadei A, Linssen ABM, Berendsen HJC (1993) Essential dynamics of proteins. Proteins Struct Funct Genet 17:412–425

3. Baher I, Atilgan AR, Erman B (1997) Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential. Fold Des 2:173

4. Bowman G R, Pande V S, Noé F (eds) (2014) An introduction to Markov state models and their application to long timescale molecular simulation. Springer, Dordrecht

5. Brooks B, Karplus M (1983) Harmonic dynamics of proteins: normal modes and fluctuations in bovine pancreatic trypsin inhibitor. Proc Natl Acad Sci USA 80:6571

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