Protein-DNA recognition mechanisms and specificity
Author:
Publisher
Springer Science and Business Media LLC
Subject
Molecular Biology,Structural Biology,Biophysics
Link
https://link.springer.com/content/pdf/10.1007/s12551-023-01137-7.pdf
Reference34 articles.
1. Ahmad S, Sarai A (2004) Moment-based prediction of DNA-binding proteins. J Mol Biol 341:65–71. https://doi.org/10.1016/j.jmb.2004.05.058
2. Anashkina AA, Tumanyan VG, Kuznetsov EN, Galkin AV, Esipova NG (2008) Relative occurrence of amino acid-nucleotide contacts assessed by Voronoi-Delaunay tessellation of protein-DNA interfaces. Biophysics 53:199–201. https://doi.org/10.1134/S0006350908030032
3. Anashkina AA, Kuznetsov EN, Batyanovskii AV et al (2018) Protein-DNA interactions: statistical analysis of interatomic contacts in the major and minor grooves. Vavilov J Genet Breed 21:887–894. https://doi.org/10.18699/VJ17.309
4. Benos PV, Lapedes AS, Stormo GD (2002) Is there a code for protein-DNA recognition? Probab(ilistical)ly. BioEssays News Rev Mol Cell Dev Biol 24:466–475. https://doi.org/10.1002/bies.10073
5. Berg OG, von Hippel PH (1987) Selection of DNA binding sites by regulatory proteins: statistical-mechanical theory and application to operators and promoters. J Mol Biol 193:723–743. https://doi.org/10.1016/0022-2836(87)90354-8
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