Aspects of protein–DNA interactions: a review of quantitative thermodynamic theory for modelling synthetic circuits utilising LacI and CI repressors, IPTG and the reporter gene lacZ

Author:

Munro Peter D.,Ackers Gary K.,Shearwin Keith E.

Funder

Australian Research Council

National Institutes of Health

Publisher

Springer Science and Business Media LLC

Subject

Molecular Biology,Structural Biology,Biophysics

Reference53 articles.

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2. Cayley S, Lewis BA, Guttman HJ, Record MT (1991) Characterization of the cytoplasm of Escherichia coli K-12 as a function of external osmolarity: implications for protein–DNA interactions in vivo. J Mol Biol 222:281–300. doi: 10.1016/0022-2836(91)90212-o

3. Chen J, Alberti S, Matthews KS (1994) Wild-type operator binding and altered cooperativity for inducer binding of lac repressor dimer mutant R3. J Biol Chem 269:12482–12487

4. Chen Y-J, Johnson S, Mulligan P, Spakowitz AJ, Phillips R (2014) Modulation of DNA loop lifetimes by the free energy of loop formation. Proc Natl Acad Sci U S A 111:17396–17401. doi: 10.1073/pnas.1415685111

5. Craven GR, Steers E, Anfinsen CB (1965) Purification, composition, and molecular weight of the beta-galactosidase of Escherichia Coli K12. J Biol Chem 240:2468–2477

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