Word Match Counts Between Markovian Biological Sequences
Author:
Publisher
Springer Berlin Heidelberg
Link
http://link.springer.com/content/pdf/10.1007/978-3-662-44485-6_11
Reference19 articles.
1. Lippert, R.A., Huang, H., Waterman, M.S.: Distributional regimes for the number of $$k$$ -word matches between two random sequences. Proc. Natl. Acad. Sci. USA 99, 13980–13989 (2002)
2. Vinga, S., Almeida, J.: Alignment-free sequence comparison-a review. Bioinformatics 19, 513–23 (2003)
3. Reinert, G., Chew, D., Sun, F., Waterman, M.S.: Alignment-free sequence comparison (I): statistics and power. J. Comput. Biol. 16, 1615–1634 (2009)
4. Göke, J., Schulz, M., Lasserre, J., Vingron, M.: Estimation of pairwise sequence similarity of mammalian enhancers with word neighbourhood counts. Bioinformatics 28, 656–663 (2012)
5. Jing, J., Wilson, S.R., Burden, C.J.: Weighted $$k$$ -word matches: A sequence comparison tool for proteins. ANZIAM J. 52(CTAC2010), 172–189 (2011)
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