A scoping review on deep learning for next-generation RNA-Seq. data analysis-Reference-Cited by-同舟云学术

A scoping review on deep learning for next-generation RNA-Seq. data analysis

Published:2023-04-21 Issue:2 Volume:23 Page:
ISSN:1438-793X
Container-title:Functional & Integrative Genomics
language:en
Short-container-title:Funct Integr Genomics

Author:

Pandey Diksha^ORCID,Onkara Perumal P.^ORCID

Publisher

Springer Science and Business Media LLC

Subject

Genetics,General Medicine

Link

https://link.springer.com/content/pdf/10.1007/s10142-023-01064-6.pdf

Reference99 articles.

1. Albrecht S, Sprang M, Andrade-Navarro MA, Fontaine JF (2021) seqQscorer: automated quality control of next-generation sequencing data using machine learning. Genome Biol 22(1). https://doi.org/10.1186/s13059-021-02294-2

2. Alipanahi B, Delong A, Weirauch MT, Frey BJ (2015) Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning. Nat Biotechnol 33(8):831–838. https://doi.org/10.1038/nbt.3300

3. Alom MZ et al (2019) A state-of-the-art survey on deep learning theory and architectures. Electronics (Switzerland) 8(3). https://doi.org/10.3390/electronics8030292

4. Andreu-Perez J, Poon CCY, Merrifield RD, Wong STC, Yang GZ (2015) Big data for health. IEEE J Biomed Health Inform 19(4):1193–1208. https://doi.org/10.1109/JBHI.2015.2450362

5. Andrews S (2010) FastQC: a quality control tool for high throughput sequence data [online]. Available online at: http://www.bioinformatics.babraham.ac.uk/projects/fastqc/

Cited by 7 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. HiOmics: A cloud-based one-stop platform for the comprehensive analysis of large-scale omics data;Computational and Structural Biotechnology Journal;2024-12

2. Application of next generation semiconductor based sequencing for species identification and meat derived products authentication;Food Control;2024-11

3. Predicting Alzheimer’s Cognitive Resilience Score: A Comparative Study of Machine Learning Models Using RNA-seq Data;2024-08-26

4. Expanding role and scope of artificial intelligence in the field of gastrointestinal pathology;Artificial Intelligence in Gastroenterology;2024-08-08

5. Optimization of Gene Selection for Cancer Classification in High-Dimensional Data Using an Improved African Vultures Algorithm;Algorithms;2024-08-06