Minimum reporting standards for plant biology context information in metabolomic studies

Author:

Fiehn Oliver,Sumner Lloyd W.,Rhee Seung Y.,Ward Jane,Dickerson Julie,Lange Bernd Markus,Lane Geoff,Roessner Ute,Last Robert,Nikolau Basil

Publisher

Springer Science and Business Media LLC

Subject

Clinical Biochemistry,Biochemistry,Endocrinology, Diabetes and Metabolism

Reference12 articles.

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2. Bino, R. J., Hall, R. D., Fiehn, O., Kopka, J., Saito, K., Draper, J., Nikolau, B. J., Mendes, P., Roessner-Tunali, U., Beale, M. H., Trethewey, R. N., Lange, B. M., Wurtele, E. S., & Sumner, L. W. (2004). Potential of metabolomics as a functional genomics tool. Trends in Plant Science, 9, 418–425.

3. Boyes, D. C., Zayed, A. M., Ascenzi, R., McCaskill, A. J., Hoffman, N. E., Davis, K. R., & Gorlach, J. (2001). Growth stage-based phenotypic analysis of Arabidopsis: A model for high throughput functional genomics in plants. Plant Cell, 13, 1499–1510.

4. Brazma, A., Hingamp, P., Quackenbush, J., Sherlock, G., Spellman, P., Stoeckert, C., Aach, J., Ansorge, W., Ball, C. A., Causton, H. C., Gaasterland, T., Glenisson, P., Holstege, F. C. P., Kim, I. F., Markowitz, V., Matese, J. C., Parkinson, H., Robinson, A., Sarans, U., Schylze-Kremer, S., Stewart, J., Taylor, R., Violo, J., & Vingron, M. (2001). Minimum information about a microarray experiment (MIAME) – towards standards for microarray data. Nature Genetics, 29, 365–371.

5. Fostel, J., Choi, D., Zwickl, C., Morrison, N., Rashid, A., Hasan, A., Bao, W., Richard, A., Tong, W., Bushel, P. R., Brown, R., Bruno, M., Cunningham, M. L., Dix, D., Eastin, W., Frade, C., Garcia, A., Heinloth, A., Irwin, R., Madenspacher, J., Merrick, B. A., Papoian, T., Paules, R., Rocca-Serra, P., Sansone, A. S., Stevens, J., Tomer, K., Yang, C., & Waters, M. (2005). Chemical effects in biological systems–data dictionary (CEBS-DD): a compendium of terms for the capture and integration of biological study design description, conventional phenotypes, and ‘omics data. Toxicolgical Sciences, 88, 585–601.

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