De novo assembly of the transcriptome of Neottopteris nidus using Illumina paired-end sequencing and development of EST-SSR markers-Reference-Cited by-同舟云学术

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De novo assembly of the transcriptome of Neottopteris nidus using Illumina paired-end sequencing and development of EST-SSR markers

Published:2016-07 Issue:7 Volume:36 Page:
ISSN:1380-3743
Container-title:Molecular Breeding
language:en
Short-container-title:Mol Breeding

Author:

Jia Xinping,Deng Yanming,Sun Xiaobo,Liang Lijian,Su Jiale

Funder

Jiangsu Provincial Agricultural Science and Technology Innovation Project

Publisher

Springer Science and Business Media LLC

Subject

Plant Science,Genetics,Agronomy and Crop Science,Molecular Biology,Biotechnology

Link

http://link.springer.com/content/pdf/10.1007/s11032-016-0519-2.pdf

Reference53 articles.

1. Aggarwal RK, Hendre PS, Varshney RK, Bhat PR, Krishnakumar V, Singh L (2007) Identification, characterization and utilization of EST-derived genic microsatellite markers for genome analyses of coffee and related species. Theor Appl Genet 114:359–372

2. Asadi AA, Monfared SR (2014) Characterization of EST–SSR markers in durum wheat EST library and functional analysis of SSR-containing EST fragments. Mol Genet Genomics 289:625–640

3. Cavagnaro PF, Senalik DA, Yang L, Simon PW, Harkins TT, Kodria CD, Huang S (2010) Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.). BMC Genom 11:569–586

4. Chen LY, Cao YN, Yuan N, Nakamura K, Wang GM, Qiu YX (2015) Characterization of transcriptome and development of novel EST–SSR makers based on next-generation sequencing technology in Neolitsea sericea (Lauraceae) endemic to East Asian land-bridge islands. Mol Breed 35:187

5. Ellwood MDF, Foster WA (2004) Doubling the estimate of invertebrate biomass in a rainforest canopy. Nature 429:549–551

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