EST-SSR marker characterization based on RNA-sequencing of Lolium multiflorum and cross transferability to related species-Reference-Cited by-同舟云学术

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EST-SSR marker characterization based on RNA-sequencing of Lolium multiflorum and cross transferability to related species

Published:2018-06 Issue:6 Volume:38 Page:
ISSN:1380-3743
Container-title:Molecular Breeding
language:en
Short-container-title:Mol Breeding

Author:

Pan Ling,Huang Ting,Yang Zhongfu,Tang Lu,Cheng Yajuan,Wang Jianping,Ma Xiao,Zhang Xinquan

Funder

the earmarked fund for Modern Agro-industry Technology Research System

the National Basic Research Program (973 program) in China

the National Natural Science Foundation of China

Publisher

Springer Science and Business Media LLC

Subject

Plant Science,Genetics,Agronomy and Crop Science,Molecular Biology,Biotechnology

Link

http://link.springer.com/article/10.1007/s11032-018-0775-4/fulltext.html

Reference31 articles.

1. Alisoltani A, Ebrahimi S, Azarian S, Hematyar M, Shiran B, Jahanbazi H, Fallahi H, Mousavi-Fard S, Rafiei F (2015) Parallel consideration of SSRs and differentially expressed genes under abiotic stress for targeted development of functional markers in almond and related Prunus species. Sci Hortic 198:462–472

2. Altermann E, Klaenhammer TR (2005) PathwayVoyager: pathway mapping using the Kyoto Encyclopedia of Genes and Genomes (KEGG) database. BMC Genomics 6(1):60. https://doi.org/10.1186/1471-2164-6-60

3. Asp T, Frei UK, Didion T, Nielsen KK, Lübberstedt T (2007) Frequency, type, and distribution of EST-SSRs from three genotypes of Lolium perenne, and their conservation across orthologous sequences of Festuca arundinacea, Brachypodium distachyon, and Oryza sativa. BMC Plant Biol 7(1):36. https://doi.org/10.1186/1471-2229-7-36

4. Ayres NM, Mcclung AM, Larkin PD, Hfj B, Jones CA, Park WD (1997) Microsatellites and a single-nucleotide polymorphism differentiate apparent amylose classes in an extended pedigree of US rice germ plasm. Theor Appl Genet 94(6):773–781. https://doi.org/10.1007/s001220050477

5. Bajgain P, Rouse MN, Anderson JA (2015) Comparing genotyping-by-sequencing and single nucleotide polymorphism chip genotyping for quantitative trait loci mapping in wheat. Crop Sci 56(1):232–248

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3. Development and validation of SSR markers related to flower color based on full-length transcriptome sequencing in Chrysanthemum;Scientific Reports;2022-12-24

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