PULLPRU: a practical approach to estimate phylogenies from single nucleotide polymorphism haplotypes under the maximum parsimony criterion

Author:

Feizabadi R.,Bagherian M.,Vaziri H. R.,Salahi M.

Funder

University of Guilan

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computational Mathematics

Reference34 articles.

1. Agarwala R, Fernández-Baca D (1994) A polynomial-time algorithm for the perfect phylogeny problem when the number of character states is fixed. SIAM J Comput 23:1216–1224

2. Bonizzoni P (2007) A linear-time algorithm for the perfect phylogeny haplotype problem. Algorithmica 48:267–285

3. Brooks DR, Bilewitch J, Condy C, Evans DC, Folinsbee KE, Fröbisch J (2007) Quantitative phylogenetic analysis in the 21st century. Rev Mex Biodivers 78:225–252

4. Bruni R (2010) Mathematical approaches to polymer sequence analysis and related problems. Springer, Berlin

5. Camin JH, Sokal RR (1965) A method for deducing branching sequences in phylogeny. Evolution 19:311–326

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