A metagenomic-based study of two sites from the Barbadian reef system

Author:

Simpson S.,Bettauer V.,Ramachandran A.,Kraemer S.,Mahon S.,Medina M.,Vallès Y.,Dumeaux V.,Vallès H.,Walsh D.,Hallett M. T.ORCID

Abstract

AbstractWe study the microbiome of sea water collected from two locations of the Barbadian coral reefs. The two sites differ in several environmental and ecological variables including their endogenous benthic community and their proximity to urban development and runoffs from inland watersheds. The composition of the microbial communities was estimated using whole genome DNA shotgun sequencing with adjuvant measurements of chemical and environmental qualities. Although both sites exhibit a similar degree of richness, the less urbanized site (Maycocks reef at Hangman’s Bay) has a strong concentration of phototrophs whereas the more urbanized location (Bellairs reef at Folkstone) is enriched for copiotrophs, macroalgal symbionts and marine-related disease-bearing organisms from taxa scattered across the tree of life. Our results are concordant with previous profiles of warm ocean surface waters, suggesting our approach captures the state of each coral reef site, setting the stage for longitudinal studies of marine microbiome dynamics in Barbados.

Funder

Natural Sciences and Engineering Research Council of Canada

Canada Research Chairs

Publisher

Springer Science and Business Media LLC

Subject

Aquatic Science

Reference32 articles.

1. Bell PR, Tomascik T (1993) The demise of the fringing coral reefs of Barbados and of regions in the Great Barrier Reef lagoon - impacts of eutrophication. Colloq Glob Asp Coral Reefs 319–325

2. Biller SJ, Berube PM, Lindell D, Chisholm SW (2015) Prochlorococcus: the structure and function of collective diversity. Nat Rev Microbiol 13:13–27

3. Burke L, Reytar K, Spalding M, Perry A (2011) Reefs at risk revisited. World Resources Institute

4. Cermes (2018) The Barbados Coral Reef Monitoring Programme: Changes in Coral Reef Communities on the West and South Coasts 2007–2012. 81

5. Dinasquet J, Landa M, Obernosterer I (2019) High contribution of Pelagibacterales to bacterial community composition and activity in spring blooms off Kerguelen Island (Southern Ocean). bioRxiv 633925

Cited by 2 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3