Transcriptome sequencing of the endangered land snail Karaftohelix adamsi from the Island Ulleung: De novo assembly, annotation, valuation of fitness genes and SSR markers-Reference-Cited by-同舟云学术

Transcriptome sequencing of the endangered land snail Karaftohelix adamsi from the Island Ulleung: De novo assembly, annotation, valuation of fitness genes and SSR markers

Published:2024-05-29 Issue:7 Volume:46 Page:851-870
ISSN:1976-9571
Container-title:Genes & Genomics
language:en
Short-container-title:Genes Genom

Author:

Park Jie Eun,Patnaik Bharat Bhusan,Sang Min Kyu,Song Dae Kwon,Jeong Jun Yang,Hong Chan Eui,Kim Yong Tae,Shin Hyeon Jun,Ziwei Liu,Patnaik Hongray Howrelia,Hwang Hee Ju,Park So Young,Kang Se Won,Ko Jung Ho,Lee Jun Sang,Park Hong Seog,Jo Yong Hun,Han Yeon Soo,Lee Yong Seok^ORCID

Funder

Korea Basic Science Institute

the National Research Foundation

Soonchunhyang University

Publisher

Springer Science and Business Media LLC

Link

https://link.springer.com/content/pdf/10.1007/s13258-024-01511-z.pdf

Reference83 articles.

1. Adamson KJ, Wang T, Zhao M, Bell F, Kuballa AV, Storey KB, Cummins SF (2015) Molecular insights into land snail neuropeptides through transcriptome and comparative gene analysis. BMC Genom 16:308. https://doi.org/10.1186/s12864-015-1510-8

2. Adema CM, Hillier LW, Jones CS, Loker ES, Knight M, Minx P et al (2017) Whole genome analysis of a schistosomiasis-transmitting freshwater snail. Nat Comm 8:15451. https://doi.org/10.1038/ncomms15451

3. Amin S, Prentis PJ, Gilding EK, Pavasovic A (2014) Assembly and annotation of a non-model gastropod (Nerita melanotragus) transcriptome: a comparison of De novo assemblers. BMC Res Not 7:488. https://doi.org/10.1186/1756-0500-7-488

4. Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G (2000) Gene Ontology: tool for the unification of biology. Nat Genet 25:25–29. https://doi.org/10.1038/75556

5. Bertucci A, Pierron F, Thebault J, Klopp C, Bellec J, Gonzalez P, Baudrimont M (2017) Transcriptomic responses of the endangered freshwater mussel Margaritifera margaritifera to trace metal contamination in the Dronne River, France. Environ Sci Poll Res 24:27145–27159. https://doi.org/10.1007/s11356-017-0294-6