Combination of RNAseq and RADseq to Identify Physiological and Adaptive Responses to Acidification in the Eastern Oyster (Crassostrea virginica)

Author:

Schwaner Caroline,Farhat Sarah,Boutet Isabelle,Tanguy Arnaud,Barbosa Michelle,Grouzdev Denis,Pales Espinosa Emmanuelle,Allam Bassem

Funder

New York Sea Grant, State University of New York

National Science Foundation

Atlantic States Marine Fisheries Commission

Publisher

Springer Science and Business Media LLC

Subject

Applied Microbiology and Biotechnology

Reference150 articles.

1. Aguilera F, McDougall C, Degnan BM (2017) Co-option and de novo gene evolution underlie molluscan shell diversity. Mol Biol Evol 34(4):779–792

2. Alexa A, Rahnenfuhrer J (2020) topGO: Enrichment analysis for gene ontology. R package version 2.40.0

3. Arivalagan J, Yarra T, Marie B, Sleight VA, Duvernois-Berthet E, Clark MS, Marie A, Berland S (2017) Insights from the shell proteome: biomineralization to adaptation. Mol Biol Evol 34:66–77

4. Barbosa M (2020) Physiological and molecular traits associated with resilience to ocean acidification in Crassostrea virginica. State University of New York at Stony Brook (Doctoral dissertation)

5. Barbosa M, Schwaner C, Pales Espinosa E, Allam B (2022) A transcriptomic analysis of phenotypic plasticity in Crassostrea virginica larvae under experimental acidification. Genes 13:1529. https://doi.org/10.3390/genes13091529

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