Single-molecule Real-time (SMRT) Sequencing Facilitates Transcriptome Research and Genome Annotation of the Fish Sillago sinica-Reference-Cited by-同舟云学术

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Single-molecule Real-time (SMRT) Sequencing Facilitates Transcriptome Research and Genome Annotation of the Fish Sillago sinica

Published:2022-09-09 Issue:5 Volume:24 Page:1002-1013
ISSN:1436-2228
Container-title:Marine Biotechnology
language:en
Short-container-title:Mar Biotechnol

Author:

Zhang Yuan,Lou Fangrui,Chen Jianwei,Han Zhiqiang,Yang Tianyan,Gao Tianxiang,Song Na

Funder

National Natural Science Foundation of China

National Science Foundation of China

Publisher

Springer Science and Business Media LLC

Subject

Applied Microbiology and Biotechnology

Link

https://link.springer.com/content/pdf/10.1007/s10126-022-10163-7.pdf

Reference61 articles.

1. Abdel-Ghany SE, Hamilton M, Jacobi JL, Ngam P, Devitt N, Schilkey F, Ben-Hur A, Reddy ASN (2016) A survey of the sorghum transcriptome using single-molecule long reads. Nat Commun 7:11706

2. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410

3. Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Tarver LI, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald MR, Rubin GM, Sherlock G (2000) Gene ontology: tool for the unification of biology. Nat Genet 25:25–29

4. Au KF, Underwood JG, Lee L, Wong WH (2012) Improving PacBio long read accuracy by short read alignment. PLoS One 7:e46679

5. Bae SE, Kwun HJ, Kim JK, Kweon SM, Kang CB (2013) New record of Sillago sinica (Pisces: Sillaginidae) in Korean waters, and re-identification of Sillago parvisquamis previously reported from Korea as S. sinica. Anim Syst Evol Divers 29:288–293

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3. Single-Molecule Real-Time Sequencing for Identifying Sexual-Dimorphism-Related Transcriptomes and Genes in the Chinese Soft-Shelled Turtle (Pelodiscus sinensis);Animals;2023-11-29

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