Analysis of Network Models with Neuron-Astrocyte Interactions
-
Published:2023-03-23
Issue:2
Volume:21
Page:375-406
-
ISSN:1539-2791
-
Container-title:Neuroinformatics
-
language:en
-
Short-container-title:Neuroinform
Author:
Manninen TiinaORCID, Aćimović JugoslavaORCID, Linne Marja-LeenaORCID
Abstract
AbstractNeural networks, composed of many neurons and governed by complex interactions between them, are a widely accepted formalism for modeling and exploring global dynamics and emergent properties in brain systems. In the past decades, experimental evidence of computationally relevant neuron-astrocyte interactions, as well as the astrocytic modulation of global neural dynamics, have accumulated. These findings motivated advances in computational glioscience and inspired several models integrating mechanisms of neuron-astrocyte interactions into the standard neural network formalism. These models were developed to study, for example, synchronization, information transfer, synaptic plasticity, and hyperexcitability, as well as classification tasks and hardware implementations. We here focus on network models of at least two neurons interacting bidirectionally with at least two astrocytes that include explicitly modeled astrocytic calcium dynamics. In this study, we analyze the evolution of these models and the biophysical, biochemical, cellular, and network mechanisms used to construct them. Based on our analysis, we propose how to systematically describe and categorize interaction schemes between cells in neuron-astrocyte networks. We additionally study the models in view of the existing experimental data and present future perspectives. Our analysis is an important first step towards understanding astrocytic contribution to brain functions. However, more advances are needed to collect comprehensive data about astrocyte morphology and physiology in vivo and to better integrate them in data-driven computational models. Broadening the discussion about theoretical approaches and expanding the computational tools is necessary to better understand astrocytes’ roles in brain functions.
Funder
Academy of Finland Partnering Project (AstroNeuronNets) to the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Specific Grant Agreement European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Specific Grant Agreement Tampere University including Tampere University Hospital, Tampere University of Applied Sciences
Publisher
Springer Science and Business Media LLC
Subject
Information Systems,General Neuroscience,Software
Reference201 articles.
1. Abed, B., Ayyoub, B., Ismail, A. R., & Abdul, N. (2020). Two suggested probabilistic and kinetic models for astrocytic network in spiking neural networks. International Journal of Advanced Trends in Computer Science and Engineering, 9(5), 7951–7957. https://doi.org/10.30534/ijatcse/2020/149952020 2. Agarwal, A., Wu, P.-H., Hughes, E. G., Fukaya, M., Tischfield, M. A., Langseth, A. J., Wirtz, D., & Bergles, D. E. (2017). Transient opening of the mitochondrial permeability transition pore induces microdomain calcium transients in astrocyte processes. Neuron, 93(3), 587–605. https://doi.org/10.1016/j.neuron.2016.12.034 3. Aguado, F., Espinosa-Parrilla, J. F., Carmona, M. A., & Soriano, E. (2002). Neuronal activity regulates correlated network properties of spontaneous calcium transients in astrocytes in situ. Journal of Neuroscience, 22(21), 9430–9444. https://doi.org/10.1523/JNEUROSCI.22-21-09430.2002 4. Agulhon, C., Petravicz, J., McMullen, A. B., Sweger, E. J., Minton, S. K., Taves, S. R., Casper, K. B., Fiacco, T. A., & McCarthy, K. D. (2008). What is the role of astrocyte calcium in neurophysiology? Neuron, 59(6), 932–946. https://doi.org/10.1016/j.neuron.2008.09.004 5. Aleksin, S. G., Zheng, K., Rusakov, D. A., & Savtchenko, L. P. (2017). ARACHNE: A neural-neuroglial network builder with remotely controlled parallel computing. PLoS Computational Biology, 13(3), e1005467. https://doi.org/10.1371/journal.pcbi.1005467
Cited by
6 articles.
订阅此论文施引文献
订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献
|
|