Strategies for array data retrieval from a relational back-end based on access patterns

Author:

Andrejev Andrej,Orsborn Kjell,Risch Tore

Abstract

AbstractMultidimensional numeric arrays are often serialized to binary formats for efficient storage and processing. These representations can be stored as binary objects in existing relational database management systems. To minimize data transfer overhead when arrays are large and only parts of arrays are accessed, it is favorable to split these arrays into separately stored chunks. We process queries expressed in an extended graph query language SPARQL, treating arrays as node values and having syntax for specifying array projection, element and range selection operations as part of a query. When a query selects parts of one or more arrays, only the relevant chunks of each array should be retrieved from the relational database. The retrieval is made by automatically generated SQL queries. We evaluate different strategies for partitioning the array content, and for generating the SQL queries that retrieve it on demand. For this purpose, we present a mini-benchmark, featuring a number of typical array access patterns. We draw some actionable conclusions from the performance numbers.

Funder

eSSENCE

Swedish Foundation for Strategic Research

Publisher

Springer Science and Business Media LLC

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Numerical Analysis,Theoretical Computer Science,Software

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