False Discovery Rate Estimation in Proteomics-Reference-Cited by-同舟云学术

False Discovery Rate Estimation in Proteomics

Published:2016 Issue: Volume: Page:119-128
ISSN:1064-3745
Container-title:Methods in Molecular Biology
language:
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Author:

Aggarwal Suruchi,Yadav Amit Kumar

Publisher

Springer New York

Link

http://link.springer.com/content/pdf/10.1007/978-1-4939-3106-4_7

Reference30 articles.

1. Storey JD, Tibshirani R (2003) Statistical significance for genomewide studies. Proc Natl Acad Sci U S A 100:9440–9445

2. Choi H, Nesvizhskii AI (2008) False discovery rates and related statistical concepts in mass spectrometry-based proteomics. J Proteome Res 7:47–50

3. Nesvizhskii AI (2010) A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics. Proteomics 73:2092–2123

4. Kall L, Storey JD, MacCoss MJ et al (2008) Assigning significance to peptides identified by tandem mass spectrometry using decoy databases. J Proteome Res 7:29–34

5. Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Stat Soc B 57:289–300

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