On Statistical Modeling of Sequencing Noise in High Depth Data to Assess Tumor Evolution
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Published:2017-12-21
Issue:1
Volume:172
Page:143-155
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ISSN:0022-4715
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Container-title:Journal of Statistical Physics
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language:en
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Short-container-title:J Stat Phys
Author:
Rabadan Raul, Bhanot Gyan, Marsilio Sonia, Chiorazzi Nicholas, Pasqualucci Laura, Khiabanian HosseinORCID
Funder
American Cancer Society
Publisher
Springer Science and Business Media LLC
Subject
Mathematical Physics,Statistical and Nonlinear Physics
Reference53 articles.
1. Benjamini, Y., Hochberg, Y.: Controlling the false discovery rate–a practical and powerful approach to multiple testing. J. R. Stat. Soc. B 57(1), 289–300 (1995) 2. Burger, J.A., Tedeschi, A., Barr, P.M., Robak, T., Owen, C., Ghia, P., Bairey, O., Hillmen, P., Bartlett, N.L., Li, J., Simpson, D., Grosicki, S., Devereux, S., McCarthy, H., Coutre, S., Quach, H., Gaidano, G., Maslyak, Z., Stevens, D.A., Janssens, A., Offner, F., Mayer, J.: ODwyer, M., Hellmann, A., Schuh, A., Siddiqi, T., Polliack, A., Tam, C.S., Suri, D., Cheng, M., Clow, F., Styles, L., James, D.F., Kipps, T.J.: Ibrutinib as initial therapy for patients with chronic lymphocytic leukemia. N. Engl. J. Med. 373(25), 2425–2437 (2015) 3. Chen, L., Liu, P., Evans, T.C., Ettwiller, L.M.: DNA damage is a pervasive cause of sequencing errors, directly confounding variant identification. Science 355(6326), 752–756 (2017) 4. Chen-Harris, H., Borucki, M.K., Torres, C., Slezak, T.R., Allen, J.E.: Ultra-deep mutant spectrum profiling: improving sequencing accuracy using overlapping read pairs. BMC Genom. 14(1), 96 (2013) 5. Ciriello, G., Miller, M.L., Aksoy, B.A., Senbabaoglu, Y., Schultz, N., Sander, C.: Emerging landscape of oncogenic signatures across human cancers. Nat. Genet. 45(10), 1127–33 (2013)
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