Genome size, ploidy levels, and development of novel SSR primer to evaluate genetic diversity of Corylopsis Siebold & Zucc. germplasm collections

Abstract

AbstractCorylopsis Seibold & Zucc. is a genus of flowering shrubs with few cultivars and little information on genome size, ploidy levels, and genetic relationships among taxa. The United States National Arboretum and collaborating gardens in North America maintain a diverse germplasm collection of Corylopsis including cultivated and wild-collected taxa. The objectives of this study were to determine genome size, ploidy, and genetic diversity in Corylopsis. Flow cytometry revealed a ploidy series of diploid, tetraploid, pentaploid, and hexaploid taxa in Corylopsis with 2C genome sizes ranging from 1.9 pg to 5.7 pg. Representative taxa were selected for root tip cytology, revealing diploid (C. platypetala Rehder & E.H. Wilson), tetraploid (C. gotoana Makino), pentaploid (unnamed hybrid selection), and hexaploid (C. willmottiae Rehder & E.H. Wilson) taxa. Seventeen genomic simple sequence repeat markers were developed and used to determine the genetic diversity of Corylopsis. These markers had an average of 7.4 alleles per locus with a range of three to 17 alleles. A dendrogram was generated by unweighted pair group method with arithmetic mean (UPGMA) cluster analysis using the Jaccard similarity coefficient to visualize genetic relationships and ploidy series within taxa. Information gained from this study will further breeding efforts and aid management of germplasm collections of Corylopsis.