Identification of sigma factor 54-regulated small non-coding RNAs by employing genome-wide and transcriptome-based methods in rhizobium strains
Author:
Publisher
Springer Science and Business Media LLC
Subject
Agricultural and Biological Sciences (miscellaneous),Environmental Science (miscellaneous),Biotechnology
Link
https://link.springer.com/content/pdf/10.1007/s13205-022-03394-x.pdf
Reference33 articles.
1. Barrios H, Valderrama B, Morett E (1999) Compilation and analysis of σ54-dependent promoter sequences. Nucleic Acids Res 27:4305–4313. https://doi.org/10.1093/nar/27.22.4305
2. Beynon J, Cannon M, Buchanan-Wollaston V, Cannon F (1983) The nif promoters of Klebsiella pneumoniae have a characteristic primary structure. Cell 34:665–671. https://doi.org/10.1016/0092-8674(83)90399-9
3. Capela D, Barloy-Hubler F, Gouzy J, Both G, Ampe F, Batut J, Galibert F (2001) Analysis of the chromosome sequence of the legume symbiont Sinorhizobium meliloti strain 1021. Proc Natl Acad Sci 98(17):9877–9882. https://doi.org/10.1073/pnas.161294398
4. Cuklina J, Hahn J, Imakaev M, Omasits U, Forstner KU, Ljubimov N, Gelfand MS (2016) Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis—a rich resource to identify new transcripts, proteins and to study gene regulation. BMC Genom 17:302. https://doi.org/10.1186/s12864-016-2602-9
5. Del Val C, Rivas E, Torres Quesada O, Toro N, Jiménez Zurdo JI (2007) Identification of differentially expressed small non-coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics. Mol Microbiol 66:1080–1091. https://doi.org/10.1111/j.1365-2958.2007.05978.x
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