Clustering genomic words in human DNA using peaks and trends of distributions

Author:

Tavares Ana HelenaORCID,Raymaekers JakobORCID,Rousseeuw Peter J.ORCID,Brito PaulaORCID,Afreixo VeraORCID

Funder

Fundação para a Ciência e a Tecnologia

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Statistics and Probability

Reference46 articles.

1. Abramowitz M, Stegun IA (1964) Handbook of mathematical functions: with formulas, graphs, and mathematical tables, vol 55. Courier Corporation

2. Afreixo V, Rodrigues JM, Bastos CA (2014) Analysis of single-strand exceptional word symmetry in the human genome: new measures. Biostatistics 16(2):209–221

3. Bajic VB, Seah SH (2003) Dragon gene start finder: an advanced system for finding approximate locations of the start of gene transcriptional units. Genome Res 13(8):1923–1929

4. Balakrishnan N, Koutras MV (2011) Runs and scans with applications, vol 764. Wiley, New York

5. Burge C, Campbell AM, Karlin S (1992) Over-and under-representation of short oligonucleotides in DNA sequences. Proc Natl Acad Sci 89(4):1358–1362

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