The Agile particle swarm optimizer applied to proteomic pattern matching and discovery

Author:

Ahmed Hazem Radwan,Glasgow Janice I.

Funder

The Natural Sciences and Engineering Research Council of Canada (NSERC)

Publisher

Springer Science and Business Media LLC

Subject

Geometry and Topology,Theoretical Computer Science,Software

Reference67 articles.

1. Ahmed H, Glasgow J (2012) Identifying the building blocks of protein structures from contact maps using protein sequence and evolutionary information. Int J Adv Life Sci 4(1–2):33–43

2. Ahmed HR, Glasgow JI (2014a) A novel particle swarm-based approach for 3D motif matching and protein structure classification. In: Sokolova M, van Beek P (eds) The 27th Canadian AI’14. Lecture notes in artificial intelligence(LNAI), vol 8436. Springer, Switzerland, pp 1–12

3. Ahmed HR, Glasgow JI (2014b) Pattern discovery in protein networks reveals high-confidence prediction of novel interactions. In: Proceedings of the 26th AAAI conference on innovative applications of artificial intelligence (IAAI’14), Québec

4. Ahmed HR, Glasgow JI (2014c) An improved multi-start particle swarm-based algorithm for protein structure comparison. In: Genetic and evolutionary computation conference (GECCO’14), Vancouver

5. Aung Z, Tan KL (2006) MatAlign: precise protein structure comparison by matrix alignment. J Bioinform Comput Biol 4(6):1197–1216

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