Genome-wide analysis of LTR-retrotransposon expression in leaves of Populus × canadensis water-deprived plants-Reference-Cited by-同舟云学术

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Genome-wide analysis of LTR-retrotransposon expression in leaves of Populus × canadensis water-deprived plants

Published:2016-07-15 Issue:4 Volume:12 Page:
ISSN:1614-2942
Container-title:Tree Genetics & Genomes
language:en
Short-container-title:Tree Genetics & Genomes

Author:

Giordani Tommaso,Cossu Rosa Maria,Mascagni Flavia,Marroni Fabio,Morgante Michele,Cavallini Andrea,Natali Lucia

Funder

MIUR, Italy

Publisher

Springer Science and Business Media LLC

Subject

Horticulture,Genetics,Molecular Biology,Forestry

Link

http://link.springer.com/content/pdf/10.1007/s11295-016-1036-5.pdf

Reference71 articles.

1. Baggerly KA, Deng L, Morris JS, Aldaz CM (2003) Differential expression in SAGE: accounting for normal between-library variation. Bioinformatics 19:1477–1483

2. Barber WT, Zhang W, Win H, Varala KK, Dorweiler JE, Hudson ME, Moose SP (2012) Repeat associated small RNAs vary among parents and following hybridization in maize. Proc Natl Acad Sci U S A 109:10444–10449

3. Barghini E, Natali L, Cossu RM, Giordani T, Pindo M, Cattonaro F, Scalabrin S, Velasco R, Morgante M, Cavallini A (2014) The peculiar landscape of repetitive sequences in the olive (Olea europaea L.) genome. Genome Biol Evol 6:776–791

4. Barghini E, Natali L, Giordani T, Cossu RM, Scalabrin S, Cattonaro F, Šimková H, Vrána J, Doležel J, Morgante M, Cavallini A (2015) LTR retrotransposon dynamics in the evolution of the olive (Olea europaea) genome. DNA Res 22:91–100

5. Bennetzen JL (2000) Transposable elements contributions to plant gene and genome evolution. Plant Mol Biol 42:251–269

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1. Retrotransposons: How the continuous evolutionary front shapes plant genomes for response to heat stress;Frontiers in Plant Science;2022-12-09

2. LTR-retrotransposon dynamics in common fig (Ficus carica L.) genome;BMC Plant Biology;2021-05-17

3. Transcriptional activity of transposable elements along an elevational gradient in Arabidopsis arenosa;Mobile DNA;2021-02-27

4. Low Long Terminal Repeat (LTR)-Retrotransposon Expression in Leaves of the Marine Phanerogam Posidonia Oceanica L.;Life;2020-03-24

5. Interspecific hybridisation and LTR-retrotransposon mobilisation-related structural variation in plants: A case study;Genomics;2020-03

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