Genomic characterization of a highly divergent tomato chlorotic mottle Guyane virus strain in the Brazilian Amazon River Basin

Author:

de Oliveira Izaías AraújoORCID,dos Reis Luciane de Nazaré AlmeidaORCID,Nery Flávia Milene BarrosORCID,Fernandes Niday Alline NunesORCID,Gonçalves Vinícius Peres Machado ReisORCID,Rojas Maria R.ORCID,Gilbertson Robert L.ORCID,Reis AiltonORCID,Boiteux Leonardo SilvaORCID,Fonseca-Boiteux Maria Esther de NoronhaORCID,Pereira-Carvalho Rita de CássiaORCID

Funder

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior

Fundação de Apoio à Pesquisa do Distrito Federal

Conselho Nacional de Desenvolvimento Científico e Tecnológico

Publisher

Springer Science and Business Media LLC

Subject

Insect Science,Plant Science

Reference10 articles.

1. Duarte, M. F., Fonseca, M. E. N., Costa, H., Fernandes, N. A., Reis, A., Boiteux, L. S., & Pereira-Carvalho, R. C. (2021). Diversity of tomato-infecting begomoviruses and spatiotemporal dynamics of an endemic viral species of the Brazilian Atlantic rain forest biome. Virus Genes, 57, 83–93.

2. Giordano, L. B., Silva-Lobo, V. L., Santana, F. M., Fonseca, M. E. N., & Boiteux, L. S. (2005). Inheritance of resistance to the bipartite tomato chlorotic mottle begomovirus derived from Lycopersicon esculentum cv. ‘Tyking.’ Euphytica, 143, 27–33. https://doi.org/10.1007/s10681-005-1685-1

3. Kearse, M., Moir, R., Wilson, A., Stones-Havas, S., Cheung, M., Sturrock, S., Buxton, S., Cooper, A., Markowitz, S., & Duran, C. (2012). Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics, 28, 1647–1649. https://doi.org/10.1093/bioinformatics/bts199

4. Lett, J. M., De Bruyn, A., Hoareau, M., Ouattara, A., Claverie, S., Dalmon, A., Laplace, D., Lefeuvre, P., & Hostachy, B. (2015). Tomato chlorotic mottle Guyane virus: A novel tomato-infecting bipartite begomovirus from French Guiana. Archives of Virology, 160, 2887–2890. https://doi.org/10.1093/bioinformatics/bts199

5. Martin, D. P., Varsani, A., Roumagnac, P., Botha, G., Maslamoney, S., Schwab, T., Kelz, Z., Kumar, V., & Murrell, B. (2021). RDP5: A computer program for analyzing recombination in, and removing signals of recombination from, nucleotide sequence datasets. Virus Evolution, 7, 1–3. https://doi.org/10.1093/ve/veaa087

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