Contribution of phenylalanine side chain intercalation to the TATA-box binding protein–DNA interaction: molecular dynamics and dispersion-corrected density functional theory studies-Reference-Cited by-同舟云学术

Contribution of phenylalanine side chain intercalation to the TATA-box binding protein–DNA interaction: molecular dynamics and dispersion-corrected density functional theory studies

Published:2014-10-30 Issue:11 Volume:20 Page:
ISSN:1610-2940
Container-title:Journal of Molecular Modeling
language:en
Short-container-title:J Mol Model

Author:

Mondal Manas,Mukherjee Sanchita,Bhattacharyya Dhananjay

Publisher

Springer Science and Business Media LLC

Subject

Computational Theory and Mathematics,Inorganic Chemistry,Organic Chemistry,Physical and Theoretical Chemistry,Computer Science Applications,Catalysis

Link

http://link.springer.com/content/pdf/10.1007/s00894-014-2499-7.pdf

Reference67 articles.

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3. Rentzeperis D, Marky LA, Dwyer TJ, Geierstanger BH, Pelton JG, Wemmer DE (1995) Interaction of minor groove ligands to an AAATT/AATTT site: correlation of thermodynamic characterization and solution structure. Biochemistry 34(9):2937–2945. doi: 10.1021/bi00009a025

4. Wemmer DE (2000) Designed sequence-specific minor groove ligands. Annu Rev Biophys Biomol Struct 29:439–461. doi: 10.1146/annurev.biophys.29.1.439

5. Peek ME, Lipscomb LA, Haseltine J, Gao Q, Roques BP, Garbay-Jaureguiberry C, Williams LD (1995) Asymmetry and dynamics in bis-intercalated DNA. Bioorg Med Chem 3(6):693–699. doi: 10.1016/0968-0896(95)00064N

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