Discovery of a new diol-containing polyketide by heterologous expression of a silent biosynthetic gene cluster from Streptomyces lavendulae FRI-5

Author:

Pait Ivy Grace Umadhay1,Kitani Shigeru1,Roslan Farah Wahidah1,Ulanova Dana12,Arai Masayoshi3,Ikeda Haruo4,Nihira Takuya15

Affiliation:

1. 0000 0004 0373 3971 grid.136593.b International Center for Biotechnology Osaka University 2-1 Yamadaoka 565-0871 Suita Osaka Japan

2. 0000 0001 0659 9825 grid.278276.e Department of Marine Resource Science, Faculty of Agriculture and Marine Science Kochi University 200 Otsu, Monobe 783-8502 Nankoku Kochi Japan

3. 0000 0004 0373 3971 grid.136593.b Graduate School of Pharmaceutical Sciences Osaka University 1-6 Yamadaoka 565-0871 Suita Osaka Japan

4. 0000 0000 9206 2938 grid.410786.c Kitasato Institute for Life Sciences Kitasato University 1-15-1 Kitasato 252-0373 Sagamihara Kanagawa Japan

5. 0000 0004 1937 0490 grid.10223.32 MU-OU Collaborative Research Center for Bioscience and Biotechnology, Faculty of Science Mahidol University Rama VI Rd 10400 Bangkok Thailand

Abstract

Abstract The genome of streptomycetes has the ability to produce many novel and potentially useful bioactive compounds, but most of which are not produced under standard laboratory cultivation conditions and are referred to as silent/cryptic secondary metabolites. Streptomyces lavendulae FRI-5 produces several types of bioactive compounds. However, this strain may also have the potential to biosynthesize more useful secondary metabolites. Here, we activated a silent biosynthetic gene cluster of an uncharacterized compound from S. lavendulae FRI-5 using heterologous expression. The engineered strain carrying the silent gene cluster produced compound 5, which was undetectable in the culture broth of S. lavendulae FRI-5. Using various spectroscopic analyses, we elucidated the chemical structure of compound 5 (named lavendiol) as a new diol-containing polyketide. The proposed assembly line of lavendiol shows a unique biosynthetic mechanism for polyketide compounds. The results of this study suggest the possibility of discovering more silent useful compounds from streptomycetes by genome mining and heterologous expression.

Funder

Japan Society for the Promotion of Science

Japan Association for Chemical Innovation

Ministry of Education, Culture, Sports, Science and Technology

Publisher

Oxford University Press (OUP)

Subject

Applied Microbiology and Biotechnology,Biotechnology,Bioengineering

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