Reconstruction of extended Petri nets from time-series data by using logical control functions
Author:
Publisher
Springer Science and Business Media LLC
Subject
Applied Mathematics,Agricultural and Biological Sciences (miscellaneous),Modeling and Simulation
Link
http://link.springer.com/content/pdf/10.1007/s00285-012-0511-3.pdf
Reference20 articles.
1. Durzinsky M, Marwan W, Wagler A, Weismantel R (2008a) Automatic reconstruction of molecular and genetic networks from experimental time series data. BioSystems 93: 181–190
2. Durzinsky M, Wagler A, Weismantel R (2008b) A combinatorial approach to reconstruct Petri nets from experimental data. In: Computational methods in systems biology, LNCS, vol 5307. Springer, Heidelberg, pp 328–346
3. Durzinsky M, Marwan W, Wagler A (2011a) Reconstruction of extended Petri nets from time series data and its application to signal transduction and to gene regulatory networks. BMC Syst Biol 5:113. doi: 10.1186/1752-0509-5-113
4. Durzinsky M, Wagler A, Weismantel R (2011b) An algorithmic framework for network reconstruction. J Theor Comput Sci 412(26): 2800–2815
5. Heiner M, Koch I (2004) Petri net based model validation in systems biology. In: 25th International conference on application and theory of Petri nets. Springer, Heidelberg, pp 216–237
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