Development and Evaluation of SSR Markers Based on Large Scale Full-Length Transcriptome Sequencing in Sugarcane-Reference-Cited by-同舟云学术

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Development and Evaluation of SSR Markers Based on Large Scale Full-Length Transcriptome Sequencing in Sugarcane

Published:2020-05-28 Issue:4 Volume:13 Page:343-352
ISSN:1935-9756
Container-title:Tropical Plant Biology
language:en
Short-container-title:Tropical Plant Biol.

Author:

Xiao Naiyan,Wang Hengbo,Yao Wei,Zhang Muqing,Ming Ray,Zhang Jisen

Funder

863 program

National Natural Science Foundation of China

Science and Technology Major Project of Guangxi

Fujian Provincial Department of Science and Technology

Science and Technology Major Project of Fujian Province

Publisher

Springer Science and Business Media LLC

Subject

Plant Science,Genetics

Link

https://link.springer.com/content/pdf/10.1007/s12042-020-09260-5.pdf

Reference41 articles.

1. Aitken KS, Jackson PA, McIntyre CL (2005) A combination of AFLP and SSR markers provides extensive map coverage and identification of homo(eo)logous linkage groups in a sugarcane cultivar. Theor Appl Genet 110:789–801. https://doi.org/10.1007/s00122-004-1813-7

2. Ali A, Jin-Da W, Yong-Bao P, Zu-Hu D, Zhi-Wei C, Ru-Kai C, San-Ji G (2017) Molecular identification and genetic diversity analysis of Chinese sugarcane (Saccharum spp. hybrids) varieties using SSR markers. Trop Plant Biol 10:194–203. https://doi.org/10.1007/s12042-017-9195-6

3. Bajgain P, Rouse M, Anderson JA (2015) Comparing genotyping-by-sequencing and single nucleotide polymorphism Chip genotyping for quantitative trait loci mapping in wheat. Crop Sci 56:232–248. https://doi.org/10.2135/cropsci2015.06.0389

4. Blanca J, Cañizares J, Roig C, Ziarsolo P, Nuez F, Picó B (2011) Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae). BMC Genomics 12:104–104. https://doi.org/10.1186/1471-2164-12-104

5. Bushman BS, Larson SR, Mott IW, Cliften PF, Wang RC, Chatterton NJ, Hernandez AG, Ali S, Kim RW, Thimmapuram J (2008) Development and annotation of perennial Triticeae ESTs and SSR markers. Genome 51:779–788

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3. Development and validation of SSR markers related to flower color based on full-length transcriptome sequencing in Chrysanthemum;Scientific Reports;2022-12-24

4. Microsatellite analysis and polymorphic marker development based on the full-length transcriptome of Camellia chekiangoleosa;Scientific Reports;2022-11-07

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