Search of Regions with Periodicity Using Random Position Weight Matrices in the Genome of C. elegans

Author:

Korotkov E. V.,Korotkova M. A.

Publisher

Springer International Publishing

Reference33 articles.

1. Korotkov, E.V., Korotkova, M.A., Kudryashov, N.A.: Information decomposition method to analyze symbolical sequences. Phys. Lett. Sect. A Gen. At. Solid State Phys. 312, 198–210 (2003)

2. Durbin, R., Eddy, S., Krogh, A., Mitchison, G.: Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids. Cambridge University Press, ‎Cambridge (1998). doi: 10.1017/CBO9780511790492

3. Suvorova, Y.M., Korotkova, M.A., Korotkov, E.V.: Comparative analysis of periodicity search methods in DNA sequences. Comput. Biol. Chem. 53(PA), 43–48 (2014). doi: 10.1016/j.compbiolchem.2014.08.008

4. Tiwari, S., Ramachandran, S., Bhattacharya, A., Bhattacharya, S., Ramaswamy, R.: Prediction of probable genes by Fourier analysis of genomic sequences. Comput. Appl. Biosci. CABIOS 13, 263–270 (1997)

5. Lobzin, V.V., Chechetkin, V.R.: Order and correlations in genomic DNA sequences. The spectral approach. Uspekhi Fiz Nauk 170, 57 (2000)

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