1. Altschul, S.F., Gish, W., Miller, W., Myers, E.W., Lipman, D.J.: Basic local alignment search tool. J. Mol. Biol. 215, 403–410 (1990)
2. Anvik, J., MacDonald, S., Szafron, D., Schaeffer, J., Bromling, S., Tan, K.: Generating parallel programs from the wavefront design pattern. In: Proceedings of the 7th International Workshop on High-Level Parallel Programming Models and Supportive Environments (HIPS’02), Fort Lauderdale, Florida, April 2002, pp. 1–8 (2002)
3. Apweiler, R., Bairoch, A., Wu, C.H., et al.: Uniprot: the universal protein knowledgebase. Nucl. Acids Res. 32(Database issue), D115–D119 (2004)
4. Berman, H., et al.: The Protein Data Bank. Nucl. Acids Res. 28, 235–242 (2000)
5. Can, T., Wang, Y.: CTSS: a robust and efficient method for protein structure alignment based on local geometrical and biological features. In: Proceedings of the 2003 IEEE Bioinformatics Conference (CSB 2003), pp. 169–179 (2003)