1. Akutsu, T., Hayashida, M., Tomita, E., Suzuki, J., Horimoto, K.: Protein threading with profiles and constraints. In: Proc. IEEE Symp. on Bioinformatics and Bioengineering (2004) (to appear)
2. Bahadur, D., Akutsu, K.C.T., Tomita, E., Seki, T., Fujiyama, A.: Point matching under non-uniform distortions and protein side chain packing based on efficient maximum clique algorithms. Genome Informatics 13, 143–152 (2002)
3. Bahadur, D., Akutsu, K.C.T., Tomita, E., Seki, T.: Protein side-chain packing: A maximum edge weight clique algorithmic approach. In: Proc. Asia-Pacific Bioinformatics Conf., pp. 191–200 (2004)
4. Bomze, M., Budinich, M., Pardalos, P.M., Pelillo, M.: The maximum clique problem. In: Du, D.-Z., Pardalos, P.M. (eds.) Handbook of Combinatorial Optimization Supplement vol. A, pp. 1–74. Kluwer Academic Publishers, Dordrecht (1999)
5. Bron, C., Kerbosch, J.: Algorithm 457, Finding all cliques of an undirected graph, Comm. ACM 16, 575–577 (1973)