A $2^{O(n^{1-{1\over d}}\log n)}$ Time Algorithm for d-Dimensional Protein Folding in the HP-Model-Reference-Cited by-同舟云学术

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A $2^{O(n^{1-{1\over d}}\log n)}$ Time Algorithm for d-Dimensional Protein Folding in the HP-Model

Published:2004 Issue: Volume: Page:630-644
ISSN:0302-9743
Container-title:Automata, Languages and Programming
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Author:

Fu Bin,Wang Wei

Publisher

Springer Berlin Heidelberg

Link

http://link.springer.com/content/pdf/10.1007/978-3-540-27836-8_54.pdf

Reference28 articles.

1. Agarwala, R., Batzoglou, S., Dancik, V., Decatur, S., Hannenhalli, S., Farach, M., Muthukrishnan, M., Skiena, S.: Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model. Journal of Computational Biology 4, 275–296 (1997)

2. Alon, N., Seymour, P., Thomas, R.: Planar Separator. SIAM J. Discr. Math. 7(2), 184–193 (1990)

3. Lecture Notes in Computer Science;R. Backofen,1998

4. Berger, B., Leighton, T.: Protein folding in the hydrophobic-hydrophilic (HP) model is NP-complete. Journal of Computational Biology 5, 27–40 (1998)

5. Cohen, F.E., Sternberg, M.J.E.: On the prediction of protein structure: the significance of the root-mean-square deviation. J. Mol. Biol. 138, 321–333 (1980)

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