Understanding the “Horizontal Dimension” of Molecular Evolution to Annotate, Classify, and Discover Proteins with Functional Domains-Reference-Cited by-同舟云学术

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Understanding the “Horizontal Dimension” of Molecular Evolution to Annotate, Classify, and Discover Proteins with Functional Domains

Published:2010-01 Issue:1 Volume:25 Page:82-94
ISSN:1000-9000
Container-title:Journal of Computer Science and Technology
language:en
Short-container-title:J. Comput. Sci. Technol.

Author:

Rendon Gloria,Ger Mao-Feng,Kantorovitz Ruth,Natarajan Shreedhar,Tilson Jeffrey,Jakobsson Eric

Publisher

Springer Science and Business Media LLC

Subject

Computational Theory and Mathematics,Computer Science Applications,Hardware and Architecture,Theoretical Computer Science,Software

Link

http://link.springer.com/content/pdf/10.1007/s11390-010-9307-3.pdf

Reference72 articles.

1. Hunter S, Apweiler R, Attwood T K et al. InterPro: The integrative protein signature database. Nucleic Acids Res., 2009, 37(Database Issue): D211–D215.

2. Orengo C A, Thornton J M. Protein families and their evolution — A structural perspective. Annual Review of Biochemistry, 2005, 74(1): 867–900.

3. Apic G, Gough J, Teichmann S A. Domain combinations in archaeal, eubacterial and eukaryotic proteomes. Journal of Molecular Biology, 2001, 310(2): 311–325.

4. Bjorklund A K, Ekman D, Light S, Frey-Skott J, Elofsson A. Domain rearrangements in protein evolution. Journal of Molecular Biology, 2005, 353(4): 911–923.

5. Moore A D, Björklund Å K, Ekman D, Bornberg-Bauer E, Elofsson A. Arrangements in the modular evolution of proteins. Trends in Biochemical Sciences, 2008, 33(9): 444–451.

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