Deep Learning-Based HLA Allele Imputation Applicable to GWAS
Reference9 articles.
1. Horton R, Wilming L, Rand V et al (2004) Gene map of the extended human MHC. Nat Rev Genet 5:889–899. https://doi.org/10.1038/nrg1489
2. Shiina T, Hosomichi K, Inoko H, Kulski JK (2009) The HLA genomic loci map: expression, interaction, diversity and disease. J Hum Genet 54:15–39. https://doi.org/10.1038/jhg.2008.5
3. Naito T, Okada Y (2022) HLA imputation and its application to genetic and molecular fine-mapping of the MHC region in autoimmune diseases. Semin Immunopathol 44:15–28. https://doi.org/10.1007/s00281-021-00901-9
4. Tian C, Hromatka BS, Kiefer AK et al (2017) Genome-wide association and HLA region fine-mapping studies identify susceptibility loci for multiple common infections. Nat Commun 8:599. https://doi.org/10.1038/s41467-017-00257-5
5. Ferreiro-Iglesias A, Lesseur C, McKay J et al (2018) Fine mapping of MHC region in lung cancer highlights independent susceptibility loci by ethnicity. Nat Commun 9:1–12. https://doi.org/10.1038/s41467-018-05890-2