Trimming and Validation of Illumina Short Reads Using Trimmomatic, Trinity Assembly, and Assessment of RNA-Seq Data
Author:
Publisher
Springer US
Link
https://link.springer.com/content/pdf/10.1007/978-1-0716-2067-0_11
Reference14 articles.
1. Goodwin S, McPherson JD, McCombie WR (2016) Coming of age: ten years of next-generation sequencing technologies. Nat Rev Genet 17:333–351. https://doi.org/10.1038/nrg.2016.49
2. Payá-Milans M, Olmstead JW, Nunez G et al (2018) Comprehensive evaluation of RNA-seq analysis pipelines in diploid and polyploid species. Gigascience 7:giy132. https://doi.org/10.1093/gigascience/giy132
3. Turner FS (2014) Assessment of insert sizes and adapter content in fastq data from NexteraXT libraries. Front Genet 5:5. https://doi.org/10.3389/fgene.2014.00005
4. Yang S-F, Lu C-W, Yao C-T, Hung C-M (2019) To trim or not to trim: effects of read trimming on the de novo genome assembly of a widespread east Asian Passerine, the Rufous-Capped Babbler (Cyanoderma ruficeps Blyth). Genes 10:737. https://doi.org/10.3390/genes10100737
5. Pereira R, Oliveira J, Sousa M (2020) Bioinformatics and computational tools for next-generation sequencing analysis in clinical genetics. J Clin Med 9:132. https://doi.org/10.3390/jcm9010132
Cited by 32 articles. 订阅此论文施引文献 订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献
1. Phylogenomics and functional analysis of Glycerol‐3‐Phosphate Acyltransferase (GPAT) Genes: A critical role in lipid biosynthesis;Physiologia Plantarum;2024-08-30
2. The complete mitochondrial genome of Mya japonica (Jay, 1857 Myida:myidae);Mitochondrial DNA Part B;2024-08-02
3. Biofilm marker discovery with cloud-based dockerized metagenomics analysis of microbial communities;Briefings in Bioinformatics;2024-07
4. Hybrid constructed wetlands and filamentous fungi for treatment of mixed sewage and industrial effluents;Environmental Science and Pollution Research;2024-06-28
5. Transcriptomics analyses reveal the key genes involved in stamen petaloid formation in Alcea rosea L.;BMC Plant Biology;2024-06-14
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3