Detecting Medium and Large Insertions and Deletions with transIndel
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Publisher
Springer US
Link
https://link.springer.com/content/pdf/10.1007/978-1-0716-2293-3_5
Reference18 articles.
1. Shlien A, Raine K, Fuligni F, Arnold R, Nik-Zainal S, Dronov S, Mamanova L, Rosic A, Ju YS, Cooke SL, Ramakrishna M, Papaemmanuil E, Davies HR, Tarpey PS, Van Loo P, Wedge DC, Jones DR, Martin S, Marshall J, Anderson E, Hardy C, Icgc Breast Cancer Working Group OBCRC, Barbashina V, Aparicio SA, Sauer T, Garred O, Vincent-Salomon A, Mariani O, Boyault S, Fatima A, Langerod A, Borg A, Thomas G, Richardson AL, Borresen-Dale AL, Polyak K, Stratton MR, Campbell PJ (2016) Direct transcriptional consequences of somatic mutation in breast cancer. Cell Rep 16(7):2032–2046. https://doi.org/10.1016/j.celrep.2016.07.028
2. Radenbaugh AJ, Ma S, Ewing A, Stuart JM, Collisson EA, Zhu J, Haussler D (2014) RADIA: RNA and DNA integrated analysis for somatic mutation detection. PLoS One 9(11):e111516. https://doi.org/10.1371/journal.pone.0111516
3. O’Brien TD, Jia P, Xia J, Saxena U, Jin H, Vuong H, Kim P, Wang Q, Aryee MJ, Mino-Kenudson M, Engelman JA, Le LP, Iafrate AJ, Heist RS, Pao W, Zhao Z (2015) Inconsistency and features of single nucleotide variants detected in whole exome sequencing versus transcriptome sequencing: a case study in lung cancer. Methods 83:118–127. https://doi.org/10.1016/j.ymeth.2015.04.016
4. Wilkerson MD, Cabanski CR, Sun W, Hoadley KA, Walter V, Mose LE, Troester MA, Hammerman PS, Parker JS, Perou CM, Hayes DN (2014) Integrated RNA and DNA sequencing improves mutation detection in low purity tumors. Nucleic Acids Res 42(13):e107. https://doi.org/10.1093/nar/gku489
5. McPherson A, Wu C, Hajirasouliha I, Hormozdiari F, Hach F, Lapuk A, Volik S, Shah S, Collins C, Sahinalp SC (2011) Comrad: detection of expressed rearrangements by integrated analysis of RNA-Seq and low coverage genome sequence data. Bioinformatics 27(11):1481–1488. https://doi.org/10.1093/bioinformatics/btr184
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