Genome-Wide Analysis of DNA–RNA Hybrids in Yeast by DRIPc-Seq and DRIP-Seq
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Publisher
Springer US
Link
https://link.springer.com/content/pdf/10.1007/978-1-0716-2477-7_28
Reference26 articles.
1. Chan YA, Aristizabal MJ, Lu PY, Luo Z, Hamza A, Kobor MS et al (2014) Genome-wide profiling of yeast DNA:RNA hybrid prone sites with DRIP-chip. PLoS Genet 10:e1004288
2. El Hage A, Webb S, Kerr A, Tollervey D (2014) Genome-wide distribution of RNA–DNA hybrids identifies RNase H targets in tRNA genes, retrotransposons and mitochondria. PLoS Genet 10:e1004716
3. Wahba L, Costantino L, Tan FJ, Zimmer A, Koshland D (2016) S1-DRIP-seq identifies high expression and polyA tracts as major contributors to R-loop formation. Genes Dev 30(11):1327–1338. https://doi.org/10.1101/gad.280834.116
4. Sanz LA, Chédin F (2019) High-resolution, strand-specific R-loop mapping via S9.6-based DNA-RNA immunoprecipitation and high-throughput sequencing. Nat Protoc 14(6):1734–1755. https://doi.org/10.1038/s41596-019-0159-1
5. Crossley MP, Bocek MJ, Hamperl S, Swigut T, Cimprich KA (2020) qDRIP: a method to quantitatively assess RNA-DNA hybrid formation genome-wide. Nucleic Acids Res 48(14):e84. https://doi.org/10.1093/nar/gkaa500
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