Dual RNA-seq Analysis of Patients’ Cells and Viral Genome After Measles Infection
Author:
Pogka Vasiliki,
Mentis Andreas,
Karamitros TimokratisORCID
Reference10 articles.
1. Garcıa-Sastre A, Sansonetti PJ (2010) Host–pathogen interactions. Curr Opin Immunol 2010(22):425–427. https://doi.org/10.1016/j.coi.2010.06.005
2. Westermann AJ, Barquist L, Vogel J (2017) Resolving host–pathogen interactions by dual RNA-seq. PLoS Pathog 13(2):e1006033. https://doi.org/10.1371/journal.ppat.1006033
3. Saliba A-E, Santos SC, Vogel J (2017) New RNA-seq approaches for the study of bacterial pathogens. Curr Opin Microbiol 35:78–87. https://doi.org/10.1016/j.mib.2017.01.001
4. Karamitros T, Pogka V, Papadopoulou G, Tsitsilonis O, Evangelidou M, Sympardi S, Mentis A (2021) Dual RNA-Seq Enables Full-Genome Assembly of Measles Virus and Characterization of Host-Pathogen Interactions. Microorganisms 9(7):1538. https://doi.org/10.3390/microorganisms9071538
5. Langmead B, Salzberg S (2012) Fast gapped-read alignment with Bowtie2. Nat Methods 9:357–359. https://doi.org/10.1038/nmeth.1923