NGS-Indel Coder v2.0: A Streamlined Pipeline to Code Indel Characters in Phylogenomic Data
Author:
Publisher
Springer US
Link
https://link.springer.com/content/pdf/10.1007/978-1-0716-2429-6_4
Reference20 articles.
1. Giribet G, Wheeler WC (1999) On gaps. Mol Phylogenet Evol 13:132–143. https://doi.org/10.1006/mpev.1999.0643
2. Simmons MP, Ochoterena H (2000) Gaps as characters in sequence-based phylogenetic analyses. Syst Biol 49:13
3. Redelings BD, Suchard MA (2007) Incorporating indel information into phylogeny estimation for rapidly emerging pathogens. BMC Evol Biol 7:40. https://doi.org/10.1186/1471-2148-7-40
4. Belinky F, Cohen O, Huchon D (2010) Large-scale parsimony analysis of metazoan indels in protein-coding genes. Mol Biol Evol 27:441–451. https://doi.org/10.1093/molbev/msp263
5. Paśko Ł, Ericson PGP, Elzanowski A (2011) Phylogenetic utility and evolution of indels: a study in neognathous birds. Mol Phylogenet Evol 61:760–771. https://doi.org/10.1016/j.ympev.2011.07.021
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