Methods to Quantitatively Measure Topological Changes Induced by DNA-Binding Proteins In Vivo and In Vitro
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Publisher
Springer US
Link
https://link.springer.com/content/pdf/10.1007/978-1-0716-3930-6_19
Reference11 articles.
1. Clark DJ, Leblanc B (2009) Analysis of DNA supercoiling induced by DNA-protein interactions. Methods Mol Biol 543:523–535. https://doi.org/10.1007/978-1-60327-015-1_30
2. Picker MA, Karney MMA, Gerson TM, Karabachev AD, Duhart JC, McKenna JA, Wing HJ (2023) Localized modulation of DNA supercoiling, triggered by the Shigella anti-silencer VirB, is sufficient to relieve H-NS-mediated silencing. Nucleic Acids Res 51(8):3679–3695. https://doi.org/10.1093/nar/gkad088
3. McLean TC, Le TB (2023) CTP switches in ParABS-mediated bacterial chromosome segregation and beyond. Curr Opin Microbiol 73:102289. https://doi.org/10.1016/j.mib.2023.102289
4. Gerson TM, Ott AM, Karney MMA, Socea JN, Ginete DR, Iyer LM, Aravind L, Gary RK, Wing HJ (2023) VirB, a key transcriptional regulator of Shigella virulence, requires a CTP ligand for its regulatory activities. MBio:e0151923. https://doi.org/10.1128/mbio.01519-23
5. Nissen MS, Reeves R (1995) Changes in superhelicity are introduced into closed circular DNA by binding of high mobility group protein I/Y. J Biol Chem 270(9):4355–4360. https://doi.org/10.1074/jbc.270.9.4355
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