Molecular dynamics study of collective water vibrations in a DNA hydration shell

Author:

Bubon TetianaORCID,Zdorevskyi Oleksii,Perepelytsya Sergiy

Funder

National Academy of Sciences of Ukraine

Publisher

Springer Science and Business Media LLC

Subject

General Medicine,Biophysics

Reference57 articles.

1. Beglov D, Roux B (1994) Finite representation of an infinite for computer simulations bulk system: solvent boundary potential. J Chem Phys 100:9050–9063. https://doi.org/10.1063/1.466711

2. Blagoi YP, Veselkov ON, Volkov SN, Govorun DM, Evstigneev MP, Zhurakivskyi RO, Kornelyuk OI, Maleev VY, Semenov MO, Sorokin VO, Kharkyanen VM, Khristoforov LM, Shestopalova GV (2012) Physical principles of molecular organization and structural dynamics of biopolymers (Kharkiv National University named after V.N. Karazin, Kharkiv), p. 352 (in Ukrainian)

3. Blagoi YP, Galkin V, Gladchenko V, Kornilova S, Sorokin V, Shkorbatov A (1991) The complexes of nucleic acids and metals in the solutions. Naukova Dumka, Kyiv

4. Bubon T, Perepelytsya S (2021) Low-frequency vibrations of water molecules in DNA minor groove. Eur Phys J E 44(6):1–10. https://doi.org/10.1140/epje/s10189-021-00080-3

5. Bulavin L, Volkov S, Kutovy SY, Perepelytsya S (2007) Observation of the DNA ion-phosphate vibrations. Reports Natl Acad Sci Ukraine 10(69)

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