Study of base pair mutations in proline-rich homeodomain (PRH)–DNA complexes using molecular dynamics
Author:
Publisher
Springer Science and Business Media LLC
Subject
General Medicine,Biophysics
Link
http://link.springer.com/content/pdf/10.1007/s00249-013-0892-2.pdf
Reference53 articles.
1. Beierlein FR, Kneale GG, Clark T (2011) Predicting the effects of basepair mutations in DNA-protein complexes by thermodynamic integration. Biophys J 101:1130–1138
2. Beveridge DL, Dicapua FM (1989) Free-energy via molecular simulation—applications to chemical and biomolecular systems. Annu Rev Biophys Biophys Chem 18:431–492
3. Billeter M (1996) Homeodomain-type DNA recognition. Prog Biophys Mol Biol 66:211–225
4. Boresch S, Tettinger F, Leitgeb M, Karplus M (2003) Absolute binding free energies: a quantitative approach for their calculation. J Phys Chem B 107:9535–9551
5. Case DA, Darden TA, Kollman PA (2008) AMBER 10. University of California, San Francisco, CA
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