Description of Agathobaculum massiliense sp. nov., a new bacterial species prevalent in the human gut and predicted to produce indole and tryptophan based on genomic analysis

Author:

Magdy Wasfy Reham,Zoaiter Malak,Bilen Melhem,Tidjani Alou Maryam,Lo Cheikh Ibrahima,Bellali Sara,Caputo Aurelia,Alibar Stéphane,Andrieu Claudia,Raoult Didier,Fournier Pierre Edouard,Million Matthieu

Funder

Agence Nationale de la Recherche

Publisher

Springer Science and Business Media LLC

Subject

Molecular Biology,General Medicine,Microbiology

Reference49 articles.

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2. Akey DL, Gehret JJ, Khare D, Smith JL (2012) Insights from the sea: structural biology of marine polyketide synthases. Nat Prod Rep 29(10):1038. https://doi.org/10.1039/C2NP20016C

3. Alcock BP, Raphenya AR, Lau TTY, Tsang KK, Bouchard M, Edalatmand A, Huynh W, Nguyen AV, Cheng AA, Liu S, Min SY, Miroshnichenko A, Tran HK, Werfalli RE, Nasir JA, Oloni M, Speicher DJ, Florescu A, Singh B, Faltyn M, Hernandez-Koutoucheva A, Sharma AN, Bordeleau E, Pawlowski AC, Zubyk HL, Dooley D, Griffiths E, Maguire F, Winsor GL, Beiko RG, Brinkman FSL, Hsiao WWL, Domselaar GV, McArthur AG, CARD (2020) Antibiotic resistome surveillance with the comprehensive antibiotic resistance database. Nucleic Acids Res 48(D1):D517–D525. https://doi.org/10.1093/nar/gkz935

4. Almagro Armenteros JJ, Tsirigos KD, Sonderby CK et al (2019) SignalP 5.0 improves signal peptide predictions using deep neural networks. Nat Biotechnol 37:420–423. https://doi.org/10.1038/s41587-019-0036-z

5. Anani H, Abdallah RA, Khoder M, Fontanini A, Mailhe M, Ricaboni D, Raoult D, Fournier PE (2019) Colibacter massiliensis gen. nov. sp. Nov., a novel gram-stain-positive anaerobic diplococcal bacterium, isolated from the human left colon. Sci Rep 9(1):17199. https://doi.org/10.1038/s41598-019-53791-1

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