MetaCoAG: Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs
Author:
Publisher
Springer International Publishing
Link
https://link.springer.com/content/pdf/10.1007/978-3-031-04749-7_5
Reference49 articles.
1. Alanko, J., Cunial, F., Belazzougui, D., et al.: A framework for space-efficient read clustering in metagenomic samples. BMC Bioinform. 18(3), 59 (2017)
2. Albertsen, M., Hugenholtz, P., Skarshewski, A., et al.: Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes. Nat. Biotechnol. 31(6), 533–538 (2013)
3. Alneberg, J., Bjarnason, B.S., de Bruijn, I., et al.: Binning metagenomic contigs by coverage and composition. Nat. Methods 11, 1144–1146 (2014)
4. Bankevich, A., Nurk, S., Antipov, D., et al.: SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J. Comput. Biol. 19(5), 455–477 (2012). PMID: 22506599
5. Barnum, T.P., Figueroa, I.A., Carlström, C.I., et al.: Genome-resolved metagenomics identifies genetic mobility, metabolic interactions, and unexpected diversity in perchlorate-reducing communities. ISME J. 12(6), 1568–1581 (2018)
Cited by 7 articles. 订阅此论文施引文献 订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献
1. Running against the clock: describing microbial diversity in an extremely endangered microbial oasis in the Chihuahuan desert;2024-09-05
2. Solving genomic puzzles: computational methods for metagenomic binning;Briefings in Bioinformatics;2024-07-25
3. Recovery of 1887 metagenome-assembled genomes from the South China Sea;Scientific Data;2024-02-13
4. Phables: from fragmented assemblies to high-quality bacteriophage genomes;Bioinformatics;2023-09-21
5. Phables: from fragmented assemblies to high-quality bacteriophage genomes;2023-04-04
1.学者识别学者识别
2.学术分析学术分析
3.人才评估人才评估
"同舟云学术"是以全球学者为主线，采集、加工和组织学术论文而形成的新型学术文献查询和分析系统，可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容，当前同舟云学术共收录了国内外主流学术期刊6万余种，收集的期刊论文及会议论文总量共计约1.5亿篇，并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询！咨询电话：010-8811{复制后删除}0370
www.globalauthorid.com
TOP
Copyright © 2019-2024 北京同舟云网络信息技术有限公司 京公网安备11010802033243号 京ICP备18003416号-3